PBANKA_1211500 (UTP13)


Aliases : UTP13

Description : SSF50978: WD40-repeat-containing domain superfamily. Pfam domain(s): PF00400: WD domain, G-beta repeat, PF08625: Utp13 specific WD40 associated domain.


Gene families : OG_01_0001602 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1211500
Cluster P. berghei: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1013100 UTP13 SSF50978: WD40-repeat-containing domain superfamily,... 0.04 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan predictions
MF GO:0005515 protein binding IEA PlasmoDB
CC GO:0005730 nucleolus ISS PlasmoDB
BP GO:0006364 rRNA processing IEA Interproscan predictions
BP GO:0006364 rRNA processing IEA PlasmoDB
CC GO:0032040 small-subunit processome ISS PlasmoDB
CC GO:0032040 small-subunit processome IEA Interproscan predictions
CC GO:0032040 small-subunit processome IEA PlasmoDB
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003724 RNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030687 preribosome, large subunit precursor IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031428 box C/D snoRNP complex IEP Predicted GO
BP GO:0031590 wybutosine metabolic process IEP Predicted GO
BP GO:0031591 wybutosine biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042273 ribosomal large subunit biogenesis IEP Predicted GO
BP GO:0042274 ribosomal small subunit biogenesis IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
CC GO:0070545 PeBoW complex IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013934 SSU_processome_Utp13 1073 1175
IPR001680 WD40_repeat 702 731
IPR001680 WD40_repeat 589 623
IPR001680 WD40_repeat 737 773