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PBANKA_1230500


Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).


Gene families : OG_01_0001681 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1230500
Cluster P. berghei: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0615700 No alias SSF54928: RNA-binding domain superfamily. Pfam... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000408 EKC/KEOPS complex IEP Predicted GO
MF GO:0004081 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity IEP Predicted GO
MF GO:0004551 nucleotide diphosphatase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004798 thymidylate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
CC GO:0005682 U5 snRNP IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005850 eukaryotic translation initiation factor 2 complex IEP Predicted GO
CC GO:0005955 calcineurin complex IEP Predicted GO
BP GO:0006233 dTDP biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007005 mitochondrion organization IEP Predicted GO
BP GO:0007006 mitochondrial membrane organization IEP Predicted GO
BP GO:0007007 inner mitochondrial membrane organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008320 protein transmembrane transporter activity IEP Predicted GO
MF GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity IEP Predicted GO
MF GO:0008796 bis(5'-nucleosyl)-tetraphosphatase activity IEP Predicted GO
BP GO:0009133 nucleoside diphosphate biosynthetic process IEP Predicted GO
BP GO:0009138 pyrimidine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009139 pyrimidine nucleoside diphosphate biosynthetic process IEP Predicted GO
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009189 deoxyribonucleoside diphosphate biosynthetic process IEP Predicted GO
BP GO:0009196 pyrimidine deoxyribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009197 pyrimidine deoxyribonucleoside diphosphate biosynthetic process IEP Predicted GO
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0010243 response to organonitrogen compound IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0016925 protein sumoylation IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
CC GO:0019005 SCF ubiquitin ligase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predicted GO
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034976 response to endoplasmic reticulum stress IEP Predicted GO
BP GO:0035690 cellular response to drug IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0036503 ERAD pathway IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0042721 TIM22 mitochondrial import inner membrane insertion complex IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045039 protein import into mitochondrial inner membrane IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0046072 dTDP metabolic process IEP Predicted GO
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051382 kinetochore assembly IEP Predicted GO
BP GO:0051383 kinetochore organization IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055074 calcium ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0070887 cellular response to chemical stimulus IEP Predicted GO
BP GO:0072507 divalent inorganic cation homeostasis IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 70 137
PlasmoDB PB102089.00.0
PlasmoDB PB406000.00.0
PlasmoDB PBANKA_123050