1. Home
  2. Species
  3. Plasmodium berghei ANKA
  4. Sequence
  5. PBANKA_1320600

PBANKA_1320600


Description : SSF69786: YggU-like superfamily. Pfam domain(s): PF02594: Uncharacterised ACR, YggU family COG1872.


Gene families : OG_01_0003068 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0003068_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1320600
Cluster P. berghei: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1456900 No alias SSF69786: YggU-like superfamily. Pfam domain(s):... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001047 core promoter binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003727 single-stranded RNA binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004825 methionine-tRNA ligase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008143 poly(A) binding IEP Predicted GO
MF GO:0008379 thioredoxin peroxidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030430 host cell cytoplasm IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030621 U4 snRNA binding IEP Predicted GO
CC GO:0031429 box H/ACA snoRNP complex IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0070717 poly-purine tract binding IEP Predicted GO
CC GO:0072588 box H/ACA RNP complex IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003746 DUF167 43 114
PlasmoDB PB001193.00.0
PlasmoDB PBANKA_132060