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  5. PBANKA_1355100

PBANKA_1355100


Description : No superfamily available. Pfam domain(s): PF01092: Ribosomal protein S6e.


Gene families : OG_01_0001949 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1355100
Cluster P. berghei: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1342000 No alias No superfamily available. Pfam domain(s): PF01092:... 0.1 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan predictions
MF GO:0003735 structural constituent of ribosome IEA PlasmoDB
CC GO:0005622 intracellular IEA Interproscan predictions
CC GO:0005622 intracellular IEA PlasmoDB
CC GO:0005840 ribosome IEA Interproscan predictions
CC GO:0005840 ribosome IEA PlasmoDB
BP GO:0006412 translation IEA Interproscan predictions
BP GO:0006412 translation IEA PlasmoDB
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0004816 asparagine-tRNA ligase activity IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0009266 response to temperature stimulus IEP Predicted GO
BP GO:0009408 response to heat IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
CC GO:0020002 host cell plasma membrane IEP Predicted GO
CC GO:0022625 cytosolic large ribosomal subunit IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
MF GO:0030544 Hsp70 protein binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0043657 host cell IEP Predicted GO
CC GO:0044216 other organism cell IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044228 host cell surface IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO
InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 126
PlasmoDB PB000942.03.0
PlasmoDB PBANKA_135510