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  5. PBANKA_1400061

PBANKA_1400061


Description : No superfamily available. Pfam domain(s): PF06022: Plasmodium variant antigen protein Cir/Yir/Bir.


Gene families : OG_01_0000026 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1400061
Cluster P. berghei: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0400100 No alias No superfamily available. Pfam domain(s): PF06022:... 0.02 Orthofinderv1.1.8
PBANKA_0600041 No alias No superfamily available. Pfam domain(s): PF06022:... 0.02 Orthofinderv1.1.8
PBANKA_0722100 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.03 Orthofinderv1.1.8
PBANKA_0836981 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0837021 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1200061 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1246921 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1300061 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1465600 No alias No superfamily available. Pfam domain(s): PF06022:... 0.04 Orthofinderv1.1.8
PBANKA_1465821 No alias No superfamily available. Pfam domain(s): PF06022:... 0.04 Orthofinderv1.1.8
PBANKA_1466201 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
CC GO:0030430 host cell cytoplasm IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006477 Yir_bir_cir 6 232
No external refs found!