PBANKA_1417800 (TRM1)


Aliases : TRM1

Description : SSF53335: S-adenosyl-L-methionine-dependent methyltransferase. Pfam domain(s): PF02005: N2,N2-dimethylguanosine tRNA methyltransferase.


Gene families : OG_01_0002076 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002076_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1417800
Cluster P. berghei: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1319300 TRM1 SSF53335: S-adenosyl-L-methionine-dependent... 0.12 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan predictions
MF GO:0003723 RNA binding IEA PlasmoDB
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity ISS PlasmoDB
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEA Interproscan predictions
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEA PlasmoDB
BP GO:0008033 tRNA processing IEA Interproscan predictions
BP GO:0008033 tRNA processing IEA PlasmoDB
CC GO:0020011 apicoplast RCA PlasmoDB
BP GO:0030488 tRNA methylation ISS PlasmoDB
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
MF GO:0004822 isoleucine-tRNA ligase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006428 isoleucyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009266 response to temperature stimulus IEP Predicted GO
BP GO:0009408 response to heat IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
CC GO:0020002 host cell plasma membrane IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030544 Hsp70 protein binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
BP GO:0031590 wybutosine metabolic process IEP Predicted GO
BP GO:0031591 wybutosine biosynthetic process IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0033677 DNA/RNA helicase activity IEP Predicted GO
MF GO:0033678 5'-3' DNA/RNA helicase activity IEP Predicted GO
MF GO:0033679 3'-5' DNA/RNA helicase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043142 single-stranded DNA-dependent ATPase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO
InterPro domains Description Start Stop
IPR002905 Trm1 280 482
IPR002905 Trm1 569 698
IPR002905 Trm1 57 178
PlasmoDB PB000555.02.0
PlasmoDB PBANKA_141780