Description : No superfamily available. Pfam domain(s): PF04900: Fcf1.
Gene families : OG_01_0003256 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0003256_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pbe RNA-seq: PBANKA_1440200 | |
Cluster | P. berghei: Cluster_30 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0032040 | small-subunit processome | IEA | Interproscan predictions |
CC | GO:0032040 | small-subunit processome | IEA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000027 | ribosomal large subunit assembly | IEP | Predicted GO |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004526 | ribonuclease P activity | IEP | Predicted GO |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
MF | GO:0008169 | C-methyltransferase activity | IEP | Predicted GO |
MF | GO:0009383 | rRNA (cytosine-C5-)-methyltransferase activity | IEP | Predicted GO |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010628 | positive regulation of gene expression | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016434 | rRNA (cytosine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predicted GO |
CC | GO:0031428 | box C/D snoRNP complex | IEP | Predicted GO |
MF | GO:0032266 | phosphatidylinositol-3-phosphate binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
MF | GO:0034511 | U3 snoRNA binding | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
BP | GO:0051259 | protein complex oligomerization | IEP | Predicted GO |
BP | GO:0051260 | protein homooligomerization | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
CC | GO:0070545 | PeBoW complex | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006984 | Fcf1/Utp23 | 179 | 225 |
PlasmoDB | PB107065.00.0 |
PlasmoDB | PBANKA_144020 |