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  5. PBANKA_1445400

PBANKA_1445400 (SEC13)


Aliases : SEC13

Description : SSF50978: WD40-repeat-containing domain superfamily. Pfam domain(s): PF00400: WD domain, G-beta repeat.


Gene families : OG_01_0003274 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0003274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1445400
Cluster P. berghei: Cluster_1


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan predictions
MF GO:0005515 protein binding IEA PlasmoDB
CC GO:0005643 nuclear pore ISO PlasmoDB
CC GO:0005654 nucleoplasm ISO PlasmoDB
CC GO:0030127 COPII vesicle coat IDA PlasmoDB
CC GO:0070971 endoplasmic reticulum exit site IDA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004690 cyclic nucleotide-dependent protein kinase activity IEP Predicted GO
MF GO:0004692 cGMP-dependent protein kinase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004825 methionine-tRNA ligase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008379 thioredoxin peroxidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0020036 Maurer's cleft IEP Predicted GO
BP GO:0031204 posttranslational protein targeting to membrane, translocation IEP Predicted GO
CC GO:0031207 Sec62/Sec63 complex IEP Predicted GO
CC GO:0031429 box H/ACA snoRNP complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033655 host cell cytoplasm part IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043264 extracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046789 host cell surface receptor binding IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0072588 box H/ACA RNP complex IEP Predicted GO
CC GO:0085026 tubovesicular membrane network IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
CC GO:1990229 iron-sulfur cluster assembly complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 49 86
IPR001680 WD40_repeat 10 40
IPR001680 WD40_repeat 150 200
PlasmoDB PB001149.01.0
PlasmoDB PB104240.00.0
PlasmoDB PBANKA_144540