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  5. PBANKA_1452400

PBANKA_1452400 (HUB1)


Aliases : HUB1

Description : SSF54236: Ubiquitin-like domain superfamily. Pfam domain(s): PF00240: Ubiquitin family.


Gene families : OG_01_0002202 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1452400
Cluster P. berghei: Cluster_1


Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome ISS PlasmoDB
MF GO:0005515 protein binding IEA Interproscan predictions
MF GO:0005515 protein binding IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predicted GO
BP GO:0000245 spliceosomal complex assembly IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005654 nucleoplasm IEP Predicted GO
CC GO:0005686 U2 snRNP IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008379 thioredoxin peroxidase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030621 U4 snRNA binding IEP Predicted GO
CC GO:0031429 box H/ACA snoRNP complex IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042273 ribosomal large subunit biogenesis IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0070971 endoplasmic reticulum exit site IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0072588 box H/ACA RNP complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 11 71
PlasmoDB PB000930.02.0
PlasmoDB PBANKA_145240