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  5. PBANKA_1455300

PBANKA_1455300


Description : SSF48452: Tetratricopeptide-like helical domain superfamily. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0002215 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1455300
Cluster P. berghei: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1241900 No alias SSF48452: Tetratricopeptide-like helical domain... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008169 C-methyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IEP Predicted GO
MF GO:0010484 H3 histone acetyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016434 rRNA (cytosine) methyltransferase activity IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predicted GO
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0043657 host cell IEP Predicted GO
BP GO:0043966 histone H3 acetylation IEP Predicted GO
CC GO:0044216 other organism cell IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

PlasmoDB PB000040.03.0
PlasmoDB PBANKA_145530