PBANKA_API00430 (rpl4)

Aliases : rpl4

Description : SSF52166: Ribosomal protein L4 domain superfamily. Pfam domain(s): PF00573: Ribosomal protein L4/L1 family.

Gene families : OG_01_0004644 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0004644_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pbe RNA-seq: PBANKA_API00430
Cluster	P. berghei: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method	Actions
PF3D7_API01300	RPL4	SSF52166: Ribosomal protein L4 domain superfamily. Pfam...	0.05	Orthofinderv1.1.8

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan predictions
MF	GO:0003735	structural constituent of ribosome	IEA	PlasmoDB
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan predictions
CC	GO:0005840	ribosome	IEA	PlasmoDB
BP	GO:0006412	translation	IEA	Interproscan predictions
BP	GO:0006412	translation	IEA	PlasmoDB
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007584	response to nutrient	IEP	Predicted GO
BP	GO:0009593	detection of chemical stimulus	IEP	Predicted GO
BP	GO:0009594	detection of nutrient	IEP	Predicted GO
BP	GO:0009991	response to extracellular stimulus	IEP	Predicted GO
BP	GO:0031667	response to nutrient levels	IEP	Predicted GO
MF	GO:0051015	actin filament binding	IEP	Predicted GO
CC	GO:0051286	cell tip	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002136	Ribosomal_L4/L1e	41	119

External Links

PlasmoDB	PBANKA_API0043

PBANKA_API00430 (rpl4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation