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  5. PF3D7_0323500

PF3D7_0323500 (SMN)


Aliases : SMN

Description : SSF63748: No description available. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0000351 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_0323500
Cluster P. falciparum: Cluster_39


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IDA PlasmoDB
MF GO:0004518 nuclease activity IDA PlasmoDB
CC GO:0005681 spliceosomal complex TAS PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000481 maturation of 5S rRNA IEP Predicted GO
MF GO:0000993 RNA polymerase II complex binding IEP Predicted GO
MF GO:0001098 basal transcription machinery binding IEP Predicted GO
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006884 cell volume homeostasis IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008361 regulation of cell size IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
MF GO:0043175 RNA polymerase core enzyme binding IEP Predicted GO
CC GO:0043657 host cell IEP Predicted GO
CC GO:0044216 other organism cell IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0070063 RNA polymerase binding IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO

No InterPro domains available for this sequence

PlasmoDB 814550
PlasmoDB MAL3P7.41
PlasmoDB PFC1050w