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  5. PF3D7_1472000

PF3D7_1472000 (ISY1)


Aliases : ISY1

Description : SSF140102: Pre-mRNA-splicing factor Isy1 superfamily. Pfam domain(s): PF06246: Isy1-like splicing family.


Gene families : OG_01_0001873 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001873_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1472000
Cluster P. falciparum: Cluster_15


Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step ISS PlasmoDB
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEA Interproscan predictions
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEA PlasmoDB
BP GO:0000389 mRNA 3'-splice site recognition ISS PlasmoDB
CC GO:0000974 Prp19 complex ISS PlasmoDB
CC GO:0071020 post-spliceosomal complex ISS PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0000146 microfilament motor activity IEP Predicted GO
BP GO:0000165 MAPK cascade IEP Predicted GO
MF GO:0000339 RNA cap binding IEP Predicted GO
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0000492 box C/D snoRNP assembly IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004301 epoxide hydrolase activity IEP Predicted GO
MF GO:0004707 MAP kinase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
CC GO:0005884 actin filament IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007166 cell surface receptor signaling pathway IEP Predicted GO
BP GO:0007219 Notch signaling pathway IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016281 eukaryotic translation initiation factor 4F complex IEP Predicted GO
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Predicted GO
MF GO:0016803 ether hydrolase activity IEP Predicted GO
BP GO:0023014 signal transduction by protein phosphorylation IEP Predicted GO
MF GO:0030507 spectrin binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
CC GO:0035770 ribonucleoprotein granule IEP Predicted GO
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predicted GO
CC GO:0043186 P granule IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044613 nuclear pore central transport channel IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
CC GO:0097255 R2TP complex IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009360 Isy1 1 193
PlasmoDB 812270
PlasmoDB PF14_0688