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  5. PBANKA_0110400

PBANKA_0110400 (EIF3L)


Aliases : EIF3L

Description : SSF48452: Tetratricopeptide-like helical domain superfamily. Pfam domain(s): PF10255: RNA polymerase I-associated factor PAF67.


Gene families : OG_01_0000484 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0110400
Cluster P. berghei: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0612100 EIF3L No superfamily available. Pfam domain(s): PF10255: RNA... 0.07 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan predictions
MF GO:0003743 translation initiation factor activity IEA PlasmoDB
MF GO:0005515 protein binding IEA PlasmoDB
CC GO:0005737 cytoplasm IEA Interproscan predictions
CC GO:0005737 cytoplasm IEA PlasmoDB
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan predictions
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
BP GO:0002143 tRNA wobble position uridine thiolation IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004343 glucosamine 6-phosphate N-acetyltransferase activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
CC GO:0005736 RNA polymerase I complex IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006047 UDP-N-acetylglucosamine metabolic process IEP Predicted GO
BP GO:0006048 UDP-N-acetylglucosamine biosynthetic process IEP Predicted GO
BP GO:0006360 transcription by RNA polymerase I IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006409 tRNA export from nucleus IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009304 tRNA transcription IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predicted GO
BP GO:0046349 amino sugar biosynthetic process IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051031 tRNA transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0097064 ncRNA export from nucleus IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:0098781 ncRNA transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR019382 eIF3l 104 524
PlasmoDB PBANKA_011040