Aliases : RPB3
Description : SSF56553: DNA-directed RNA polymerase, insert domain superfamily, SSF55257: RNA polymerase, RBP11-like subunit. Pfam domain(s): PF01193: RNA polymerase Rpb3/Rpb11 dimerisation domain, PF01000: RNA polymerase Rpb3/RpoA insert domain.
Gene families : OG_01_0001017 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pbe RNA-seq: PBANKA_0823900 | |
Cluster | P. berghei: Cluster_42 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | PlasmoDB |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan predictions |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | PlasmoDB |
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan predictions |
BP | GO:0006351 | transcription, DNA-templated | IEA | PlasmoDB |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan predictions |
MF | GO:0046983 | protein dimerization activity | IEA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Predicted GO |
MF | GO:0000339 | RNA cap binding | IEP | Predicted GO |
BP | GO:0000349 | generation of catalytic spliceosome for first transesterification step | IEP | Predicted GO |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Predicted GO |
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0003688 | DNA replication origin binding | IEP | Predicted GO |
MF | GO:0003713 | transcription coactivator activity | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004326 | tetrahydrofolylpolyglutamate synthase activity | IEP | Predicted GO |
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predicted GO |
MF | GO:0004462 | lactoylglutathione lyase activity | IEP | Predicted GO |
MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004659 | prenyltransferase activity | IEP | Predicted GO |
MF | GO:0004661 | protein geranylgeranyltransferase activity | IEP | Predicted GO |
MF | GO:0004663 | Rab geranylgeranyltransferase activity | IEP | Predicted GO |
MF | GO:0004802 | transketolase activity | IEP | Predicted GO |
MF | GO:0004824 | lysine-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005845 | mRNA cap binding complex | IEP | Predicted GO |
CC | GO:0005956 | protein kinase CK2 complex | IEP | Predicted GO |
CC | GO:0005968 | Rab-protein geranylgeranyltransferase complex | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006430 | lysyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
BP | GO:0006541 | glutamine metabolic process | IEP | Predicted GO |
BP | GO:0006542 | glutamine biosynthetic process | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
MF | GO:0008318 | protein prenyltransferase activity | IEP | Predicted GO |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0015959 | diadenosine polyphosphate metabolic process | IEP | Predicted GO |
BP | GO:0015960 | diadenosine polyphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0015965 | diadenosine tetraphosphate metabolic process | IEP | Predicted GO |
BP | GO:0015966 | diadenosine tetraphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016211 | ammonia ligase activity | IEP | Predicted GO |
MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predicted GO |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0018342 | protein prenylation | IEP | Predicted GO |
BP | GO:0018344 | protein geranylgeranylation | IEP | Predicted GO |
CC | GO:0018444 | translation release factor complex | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
MF | GO:0032266 | phosphatidylinositol-3-phosphate binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
CC | GO:0034399 | nuclear periphery | IEP | Predicted GO |
CC | GO:0034518 | RNA cap binding complex | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predicted GO |
BP | GO:0097354 | prenylation | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
PlasmoDB | PB000051.00.0 |
PlasmoDB | PBANKA_082390 |