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PBANKA_1234300 (CCR4-1)


Aliases : CCR4-1

Description : SSF56219: Endonuclease/exonuclease/phosphatase superfamily. Pfam domain(s): PF03372: Endonuclease/Exonuclease/phosphatase family.


Gene families : OG_01_0002986 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1234300
Cluster P. berghei: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0519500 CCR4-1 SSF56219: Endonuclease/exonuclease/phosphatase... 0.02 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0020033 antigenic variation IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032051 clathrin light chain binding IEP Predicted GO
MF GO:0042800 histone methyltransferase activity (H3-K4 specific) IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
BP GO:0048268 clathrin coat assembly IEP Predicted GO
BP GO:0051809 passive evasion of immune response of other organism involved in symbiotic interaction IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
CC GO:0071006 U2-type catalytic step 1 spliceosome IEP Predicted GO
CC GO:0071012 catalytic step 1 spliceosome IEP Predicted GO
CC GO:0071439 clathrin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 1372 1746
PlasmoDB PB000509.03.0
PlasmoDB PBANKA_123430