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  5. PBANKA_1319800

PBANKA_1319800 (SHMT)


Aliases : SHMT

Description : SSF53383: Pyridoxal phosphate-dependent transferase. Pfam domain(s): PF00464: Serine hydroxymethyltransferase.


Gene families : OG_01_0004547 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0004547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1319800
Cluster P. berghei: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1456100 SHMT SSF53383: Pyridoxal phosphate-dependent transferase.... 0.06 Orthofinderv1.1.8

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISO PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000172 ribonuclease MRP complex IEP Predicted GO
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0004151 dihydroorotase activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Predicted GO
CC GO:0005838 proteasome regulatory particle IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006498 N-terminal protein lipidation IEP Predicted GO
BP GO:0006499 N-terminal protein myristoylation IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006863 purine nucleobase transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0015205 nucleobase transmembrane transporter activity IEP Predicted GO
MF GO:0015211 purine nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0015851 nucleobase transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015860 purine nucleoside transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016273 arginine N-methyltransferase activity IEP Predicted GO
MF GO:0016274 protein-arginine N-methyltransferase activity IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018195 peptidyl-arginine modification IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
BP GO:0018216 peptidyl-arginine methylation IEP Predicted GO
BP GO:0018377 protein myristoylation IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
BP GO:0035246 peptidyl-arginine N-methylation IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044161 host cell cytoplasmic vesicle IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0072530 purine-containing compound transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 84 432
PlasmoDB PB000246.03.0
PlasmoDB PBANKA_131980